PeptideShaker Free
Extracting information from your proteins and peptides
PeptideShaker takes you from data collection to QC report generation, identifying sequence variants and more.
Improve the detection of variants in your proteins and peptides
PeptideShaker works with X!Tandem, Comet, Proteome Discoverer, DataExplorer, and Sequest to identify the amino acid sequence of your proteins and peptides, then populate the list with useful information.
Build 3D models from your sequences
PeptideShaker provides all-new capabilities to build a model for any type of protein or peptide using the MolAxis platform.
A comprehensive, web-based analysis suite for your proteins and peptides
A fully-featured interface for cross-platform data comparison and analysis.
System Requirements:
PeptideShaker is available for Windows 7 and 8, and Mac OSX.
If you need assistance installing the program, visit this page:
PeptideShaker Features:
Identify variants and unique sequences
PeptideShaker works with X!Tandem, Comet, Proteome Discoverer, DataExplorer, and Sequest to identify the sequence of your proteins and peptides. It then matches your data against appropriate databases to search for similar sequences. PeptideShaker generates a list of candidate variants with statistical values to help you choose which ones to act on.
Generate alignment diagrams
PeptideShaker generates comprehensive alignment diagrams for a variety of options.
Generate MS2 spectra plots
PeptideShaker generates MS2 spectra plots so users can easily compare results.
Obtain peptide statistics
PeptideShaker gathers all the peptide data you’ll ever need and presents you with the most useful information.
Consult detailed QC plots
PeptideShaker generates comprehensive QC plots for X!Tandem and OMSSA to provide you with a complete understanding of your protein data.
Work with MolAxis
PeptideShaker allows users to build 3D models using MolAxis.
Build protein and peptide sequences
Comet, Proteome Discoverer and DataExplorer are used to extract and link amino acid sequences
PeptideShaker For PC [Updated]
An efficient analysis platform for peptides and proteins. This comprehensive application can be used as an analysis tool, a visualization tool and a custom data converter (for rare formats). With PeptideShaker users can easily perform large-scale peptide identification, proteogenomics and gene ontology enrichments, as well as peptide/protein annotation.
Key features:
• Query nine online peptide/protein online analysis algorithms
• Load and transfer data files from all major platforms
• Create and export peptide annotation data files
• Query multiple databases via bioinformatics resources
• Generate and export graphic images
• Show peptides matching with protein data
• Perform protein and peptide QC plots, 3D and 2D structure
PeptideShaker Description:
An efficient analysis platform for peptides and proteins. This comprehensive application can be used as an analysis tool, a visualization tool and a custom data converter (for rare formats). With PeptideShaker users can easily perform large-scale peptide identification, proteogenomics and gene ontology enrichments, as well as peptide/protein annotation.
Key features:
• Query nine online peptide/protein online analysis algorithms
• Load and transfer data files from all major platforms
• Create and export peptide annotation data files
• Query multiple databases via bioinformatics resources
• Generate and export graphic images
• Show peptides matching with protein data
• Perform protein and peptide QC plots, 3D and 2D structure
PeptideShaker Descibing:
An efficient analysis platform for peptides and proteins. This comprehensive application can be used as an analysis tool, a visualization tool and a custom data converter (for rare formats). With PeptideShaker users can easily perform large-scale peptide identification, proteogenomics and gene ontology enrichments, as well as peptide/protein annotation.
Key features:
• Query nine online peptide/protein online analysis algorithms
• Load and transfer data files from all major platforms
• Create and export peptide annotation data files
• Query multiple databases via bioinformatics resources
• Generate and export graphic images
• Show peptides matching with protein data
• Perform protein and peptide QC plots, 3D and 2D structure
PeptideShaker Descibing:
An efficient analysis platform for peptides and proteins. This comprehensive application can be used as an analysis tool, a visualization tool and
f0d5c1b395

Related

Items